The REDACLE Work-Flow Management System
In our application, humans interact with the database in a multitude of ways—with the MySQL client, C++ and Java programs, Perl scripts and PHP scripts through Web pages. The use of a Web browser to render a graphical user interface (GUI) provides considerable advantages. The GUI is portable and does not require installation of specific components, no time is wasted on graphics, and the Web browser environment is well known by now to both operators or customers.
Another significant feature of REDACLE is its interface to other machines. During the calorimeter construction process, automatic machines take measurements of crystals and other parts without any human support (Figure 2). These machines, then, must be able to interact with REDACLE to learn the right sequence of operations to perform, to inform it about the start and the end time of the operations and to provide data to be stored as characteristics.
Our goal was to create a system that would allow almost any device to interact with REDACLE. We avoided imposing a given programming language or providing libraries for all the possible devices, because it does not scale with the market. Furthermore, some devices can be embedded systems with proprietary software.
We developed a dæmon called the Instrument Agent (IA) to act as an interface between REDACLE and instruments. The IA is a process that connects to an Internet port and is able to read ASCII characters and write them to that port. Instruments are required only to be able to connect to the network and send strings over the connection.
The sequence of operations is as follows:
After connecting, an instrument declares the part on which it is operating.
The IA queries the REDACLE database and searches for the last completed activity for that part in the work flow. The command the instrument should execute is stored in the database as a description field in the activityDefinition table.
The IA sends the instrument the proper command.
Upon recognition of the command, the instrument executes it, and the IA inserts a new activity in the REDACLE database after acknowledgement.
At the end of the job, the IA updates the activity just inserted, marks it as FINISHED and gets the data from the instrument as XML-formatted strings.
The result of the activity may contain both multiValue and charValue fields. Single values are formatted as follows:
<RE><FI>field name<VA>field value</VA></FI>...</RE>
<RE> stands for result, <FI> is field and <VA> is value. From the field name, the instrument agent obtains the characteristics definition ID and fills in the appropriate table according to the field value format (value for numbers and charValue for strings). The multiValue table is populated if the result is of the form:
<RE><NT>ntuple name <FI>field name<VA>field value</VA></FI> ... </NT></RE>
<NT> here stands for n-tuple, a collection of n elements.
Instrument software developers need not have knowledge of the details of the REDACLE database; they simply have to be instructed on the string formats to be used. No libraries to link to the program are prescribed, nor files to be included. The programming language is not imposed. The only requirement is to be able to provide a network connection to the IA.
Besides the GUI and instrument interfaces, we developed a set of ancillary command-line scripts for administrators and coordinators. In addition, we created a small library to run C++ programs and Perl scripts over the database without needing to formulate SQL queries.
REDACLE was released in our laboratory four months after the first discussions of the project were held. The whole system contains about 10,000 lines of code in Perl, C++, PHP and Java. The resources needed to run the software are small compared to the ones requested by the former system, hosted on a dual 800MHz Pentium III server. That system saturated the CPU at about 100% and occupied almost all of the 512MB of RAM. We also needed to upgrade all the client PCs, doubling their memories to support Java GUIs. So we planned a server upgrade to a dual 1GHz Pentium III with 1GB of RAM to improve the performance of the previous system. When using REDACLE, we discovered, amazingly enough, that CPU load was negligible and the average memory usage was 140–200MB.
It became clear that we had a need for tools to import from or export to the previous database, which still was used in other labs. These tools were built in Perl quickly, to read or write XML files, and we were able to import all the old data into REDACLE in one day.
Currently, we have about 13,000 parts in the database. The stored characteristics are 97,000, each of which may be composed of several values, for a total database size of 50MB. Out of the 15 tables the multiValue table, containing more than 1,000,000 records, is the largest at 41MB.
But the most spectacular result was obtained by comparing the time spent by operators in the calorimeter assembling. Before the introduction of REDACLE, 25% of the operators' time was wasted in the interaction with the work-flow manager. Using REDACLE, the interaction between operators and the database takes a negligible amount of time, improving the overall detector assembling efficiency.
Moreover, operators soon familiarized themselves with REDACLE's flexibility and started requesting new tools and interfaces. What before required weeks to develop or might have been almost impossible to build, now can be implemented in a short time with REDACLE and LAMP—between a few hours and two or three days.
The extraordinary flexibility of the REDACLE database design makes it practical for many different business processes and industrial applications, clearly illustrating how open-source software can be superior to proprietary offerings. In the future, we plan to support even more complex work-flow models as well as a library of frequently used queries and functions to be employed in the development of other REDACLE-based projects.
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- PostgreSQL, the NoSQL Database
- Sharing Admin Privileges for Many Hosts Securely
- HPC Cluster Grant Accepting Applications!
- Internet of Things Blows Away CES, and it May Be Hunting for YOU Next
- Designing with Linux
- Wondershaper—QOS in a Pinch
- Ideal Backups with zbackup
- Red Hat Enterprise Linux 7.1 beta available on IBM Power Platform
- Slow System? iotop Is Your Friend
- January 2015 Issue of Linux Journal: Security
Editorial Advisory Panel
Thank you to our 2014 Editorial Advisors!
- Jeff Parent
- Brad Baillio
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- Chadalavada Kalyana
- Caleb Cullen
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- Michael Eager
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- Dennis Frey
- Philip Jacob
- Jay Kruizenga
- Steve Marquez
- Dave McAllister
- Craig Oda
- Mike Roberts
- Chris Stark
- Patrick Swartz
- David Lynch
- Alicia Gibb
- Thomas Quinlan
- Carson McDonald
- Kristen Shoemaker
- Charnell Luchich
- James Walker
- Victor Gregorio
- Hari Boukis
- Brian Conner
- David Lane